(* search using all data *)
read("9.fas", "31.ss", aminoacids:("41.aa"))
set(seed:1, log:"all_data_search.log", root:"t1")
report(timer:"search start")
transform (tcm:(1,2), gap_opening:1)
build(250)
swap(threshold:5.0)
select()
perturb(transform(static_approx), iterations:15,ratchet:(0.2,3))
select()
fuse(iterations:200, swap())
select()
report("all_trees", trees:(total) ,"constree", graphconsensus,
"diagnosis", diagnosis)
report(timer:"search end")
set(nolog)
exit()
