(*search using all data*)

read("9.fas","31.ss")
read(prealigned:(aminoacids:("41_aln.aa"),tcm:"s1t2.mat"))
set(log:"all_data_search.log",root:"t1")
report(timer:"search_start")
build(250)
swap(threshold:5.0)
select(unique)
perturb(transform(static_approx),iterations:15,ratchet:(0.2,3))
select()
fuse(iterations:200,swap())
select()
report("all_trees.tre",trees:(total),"all_trees_cs.pdf",graphconsensus,"all_trees_diag.txt",diagnosis)
report(timer:"search_end")
set(nolog)
exit()